Merge branch '83-implement-nfp-logic-for-cervix-mode' into 'master'

Resolve "implement nfp logic for cervix mode"

Closes #83

See merge request bloodyhealth/drip!38
This commit is contained in:
bl00dymarie
2018-09-14 06:27:12 +00:00
15 changed files with 1456 additions and 751 deletions
+3
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@@ -25,3 +25,6 @@ You can run the tests with `npm test`.
## Debugging
When running into an old version of the app try to run the following command first:
`react-native bundle --platform android --dev false --entry-file index.js --bundle-output android/app/src/main/assets/index.android.bundle --assets-dest android/app/src/main/res`
## NFP rules
More information about how the app calculates fertility status and bleeding predictions in the [wiki on Gitlab](https://gitlab.com/bloodyhealth/drip/wikis/home)
+1 -1
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@@ -135,4 +135,4 @@ export default class DayColumn extends Component {
</View>
)
}
}
}
+10 -4
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@@ -8,7 +8,7 @@ import {
import { LocalDate, ChronoUnit } from 'js-joda'
import styles from '../styles/index'
import cycleModule from '../lib/cycle'
import { getOrCreateCycleDay, bleedingDaysSortedByDate, fillWithDummyData, deleteAll } from '../db'
import { getOrCreateCycleDay, bleedingDaysSortedByDate, fillWithMucusDummyData, fillWithCervixDummyData, deleteAll } from '../db'
import {bleedingPrediction as labels} from './labels'
const getCycleDayNumber = cycleModule().getCycleDayNumber
@@ -62,8 +62,14 @@ export default class Home extends Component {
</View>
<View style={styles.homeButton}>
<Button
onPress={() => fillWithDummyData()}
title="fill with example data">
onPress={() => fillWithMucusDummyData()}
title="fill with example data for mucus&temp">
</Button>
</View>
<View style={styles.homeButton}>
<Button
onPress={() => fillWithCervixDummyData()}
title="fill with example data for cervix&temp">
</Button>
</View>
<View style={styles.homeButton}>
@@ -107,4 +113,4 @@ function determinePredictionText() {
} else {
return labels.predictionStartedXDaysLeft(daysToEnd)
}
}
}
+74 -4
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@@ -1,6 +1,9 @@
function convertToSymptoFormat(val) {
const sympto = { date: val.date }
if (val.temperature) sympto.temperature = { value: val.temperature, exclude: false }
if (val.temperature) sympto.temperature = {
value: val.temperature,
exclude: false
}
if (val.mucus) sympto.mucus = {
value: val.mucus,
exclude: false,
@@ -11,7 +14,7 @@ function convertToSymptoFormat(val) {
return sympto
}
export const cycleWithFhm = [
export const cycleWithFhmMucus = [
{ date: '2018-07-01', bleeding: 2 },
{ date: '2018-07-02', bleeding: 1 },
{ date: '2018-07-06', temperature: 36.2},
@@ -26,7 +29,7 @@ export const cycleWithFhm = [
{ date: '2018-07-18', temperature: 36.9, mucus: 2 }
].map(convertToSymptoFormat).reverse()
export const longAndComplicatedCycle = [
export const longAndComplicatedCycleWithMucus = [
{ date: '2018-06-01', temperature: 36.6, bleeding: 2 },
{ date: '2018-06-02', temperature: 36.65 },
{ date: '2018-06-04', temperature: 36.6 },
@@ -70,4 +73,71 @@ export const cycleWithTempAndNoMucusShift = [
{ date: '2018-05-24', temperature: 36.85, mucus: 4 },
{ date: '2018-05-26', temperature: 36.8, mucus: 4 },
{ date: '2018-05-27', temperature: 36.9, mucus: 4 }
].map(convertToSymptoFormat).reverse()
].map(convertToSymptoFormat).reverse()
export const cycleWithFhmCervix = [
{ date: '2018-08-01', bleeding: 2 },
{ date: '2018-08-02', bleeding: 1 },
{ date: '2018-08-03', bleeding: 0 },
{ date: '2018-08-04', bleeding: 0 },
{ date: '2018-08-05', temperature: 36.07 },
{ date: '2018-08-06', temperature: 36.2 },
{ date: '2018-08-07', temperature: 36.35 },
{ date: '2018-08-08', temperature: 36.4 },
{ date: '2018-08-09', temperature: 36.3 },
{ date: '2018-08-10', temperature: 36.45 },
{ date: '2018-08-11', temperature: 36.45 },
{ date: '2018-08-12', temperature: 36.7, cervix: { opening: 1, firmness: 1 } },
{ date: '2018-08-13', temperature: 36.8, cervix: { opening: 0, firmness: 0 } },
{ date: '2018-08-14', temperature: 36.75, cervix: { opening: 0, firmness: 0 } },
{ date: '2018-08-15', temperature: 36.9, cervix: { opening: 0, firmness: 0 } },
{ date: '2018-08-16', temperature: 36.95, cervix: { opening: 0, firmness: 0 } },
{ date: '2018-08-17', temperature: 36.9, cervix: { opening: 0, firmness: 0 } },
{ date: '2018-08-18', temperature: 36.9, cervix: { opening: 1, firmness: 0 } }
].map(convertToSymptoFormat).reverse()
export const longAndComplicatedCycleWithCervix = [
{ date: '2018-06-01', temperature: 36.6, bleeding: 2 },
{ date: '2018-06-02', temperature: 36.65 },
{ date: '2018-06-04', temperature: 36.6 },
{ date: '2018-06-05', temperature: 36.55 },
{ date: '2018-06-06', temperature: 36.7, cervix: { opening: 1, firmness: 1 } },
{ date: '2018-06-09', temperature: 36.5, cervix: { opening: 1, firmness: 1 } },
{ date: '2018-06-10', temperature: 36.4, cervix: { opening: 1, firmness: 1 } },
{ date: '2018-06-13', temperature: 36.45, cervix: { opening: 1, firmness: 1 } },
{ date: '2018-06-14', temperature: 36.5, cervix: { opening: 1, firmness: 1 } },
{ date: '2018-06-15', temperature: 36.55, cervix: { opening: 0, firmness: 0 } },
{ date: '2018-06-16', temperature: 36.7, cervix: { opening: 0, firmness: 0 } },
{ date: '2018-06-17', temperature: 36.65, cervix: { opening: 1, firmness: 1 } },
{ date: '2018-06-18', temperature: 36.75, cervix: { opening: 0, firmness: 0 } },
{ date: '2018-06-19', temperature: 36.8, cervix: { opening: 1, firmness: 0 } },
{ date: '2018-06-20', temperature: 36.85, cervix: { opening: 0, firmness: 0 } },
{ date: '2018-06-21', temperature: 36.8, cervix: { opening: 0, firmness: 0 } },
{ date: '2018-06-22', temperature: 36.9, cervix: { opening: 0, firmness: 0 } },
{ date: '2018-06-25', temperature: 36.9, cervix: { opening: 0, firmness: 0 } },
{ date: '2018-06-26', temperature: 36.8, cervix: { opening: 1, firmness: 1 } },
{ date: '2018-06-27', temperature: 36.9, cervix: { opening: 1, firmness: 1 } }
].map(convertToSymptoFormat).reverse()
export const cycleWithTempAndNoCervixShift = [
{ date: '2018-07-01', temperature: 36.6, bleeding: 2 },
{ date: '2018-07-02', temperature: 36.65 },
{ date: '2018-07-05', temperature: 36.55 },
{ date: '2018-07-06', temperature: 36.7, cervix: { opening: 0, firmness: 0 } },
{ date: '2018-07-08', temperature: 36.45, cervix: { opening: 0, firmness: 0 } },
{ date: '2018-07-09', temperature: 36.5, cervix: { opening: 1, firmness: 1 } },
{ date: '2018-07-10', temperature: 36.4, cervix: { opening: 0, firmness: 0 } },
{ date: '2018-07-11', temperature: 36.5, cervix: { opening: 0, firmness: 1 } },
{ date: '2018-07-13', temperature: 36.45, cervix: { opening: 0, firmness: 1 } },
{ date: '2018-07-14', temperature: 36.5, cervix: { opening: 1, firmness: 1 } },
{ date: '2018-07-15', temperature: 36.55, cervix: { opening: 1, firmness: 1 } },
{ date: '2018-07-16', temperature: 36.7, cervix: { opening: 0, firmness: 1 } },
{ date: '2018-07-17', temperature: 36.65, cervix: { opening: 0, firmness: 1 } },
{ date: '2018-07-18', temperature: 36.75, cervix: { opening: 1, firmness: 1 } },
{ date: '2018-07-19', temperature: 36.8, cervix: { opening: 1, firmness: 1 } },
{ date: '2018-07-20', temperature: 36.85, cervix: { opening: 1, firmness: 1 } },
{ date: '2018-07-23', temperature: 36.9, cervix: { opening: 0, firmness: 1 } },
{ date: '2018-07-24', temperature: 36.85, cervix: { opening: 1, firmness: 1 } },
{ date: '2018-07-26', temperature: 36.8, cervix: { opening: 1, firmness: 1 } },
{ date: '2018-07-27', temperature: 36.9, cervix: { opening: 1, firmness: 1 } }
].map(convertToSymptoFormat).reverse()
+36 -6
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@@ -1,9 +1,12 @@
import Realm from 'realm'
import { LocalDate, ChronoUnit } from 'js-joda'
import {
cycleWithFhmMucus,
longAndComplicatedCycleWithMucus,
cycleWithTempAndNoMucusShift,
cycleWithFhm,
longAndComplicatedCycle
cycleWithFhmCervix,
longAndComplicatedCycleWithCervix,
cycleWithTempAndNoCervixShift
} from './fixtures'
const TemperatureSchema = {
@@ -179,10 +182,10 @@ function getCycleDay(localDate) {
return db.objectForPrimaryKey('CycleDay', localDate)
}
function fillWithDummyData() {
function fillWithMucusDummyData() {
const dummyCycles = [
cycleWithFhm,
longAndComplicatedCycle,
cycleWithFhmMucus,
longAndComplicatedCycleWithMucus,
cycleWithTempAndNoMucusShift
]
@@ -204,6 +207,32 @@ function fillWithDummyData() {
})
}
function fillWithCervixDummyData() {
const dummyCycles = [
cycleWithFhmCervix,
longAndComplicatedCycleWithCervix,
cycleWithTempAndNoCervixShift
]
db.write(() => {
db.deleteAll()
dummyCycles.forEach(cycle => {
cycle.forEach(day => {
const existing = getCycleDay(day.date)
if (existing) {
Object.keys(day).forEach(key => {
if (key === 'date') return
existing[key] = day[key]
})
} else {
db.create('CycleDay', day)
}
})
})
})
}
function deleteAll() {
db.write(() => {
db.deleteAll()
@@ -266,7 +295,8 @@ export {
bleedingDaysSortedByDate,
temperatureDaysSortedByDate,
cycleDaysSortedByDate,
fillWithDummyData,
fillWithMucusDummyData,
fillWithCervixDummyData,
deleteAll,
getPreviousTemperature,
getCycleDay,
+52
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@@ -0,0 +1,52 @@
export default function (cycleDays, tempEvalEndIndex) {
const notDetected = { detected: false }
const cervixDays = cycleDays
.filter(day => day.cervix && !day.cervix.exclude)
.filter(day => typeof day.cervix.opening === 'number' && typeof day.cervix.firmness === 'number')
// we search for the day of cervix peak, which must:
// * have fertile cervix values
// * be followed by at least 3 days
// these 3 following days must all show infertile cervix values
// if everything applies we must check the days until the end of temperature evaluation
// during these relevantDays no fertile cervix must occur
for (let i = 0; i < cervixDays.length; i++) {
const day = cervixDays[i]
if (isClosedAndHard(day.cervix)) continue
// the three following days must be with closed and hard cervix (indicating an infertile cervix)
const threeFollowingDays = cervixDays.slice(i + 1, i + 4)
if (threeFollowingDays.length < 3) continue
// no other fertile cervix value may occur until temperature evaluation has
// been completed
const fertileCervixOccursIn3FollowingDays = threeFollowingDays.some(day => {
return !isClosedAndHard(day.cervix)
})
if (fertileCervixOccursIn3FollowingDays) continue
const cycleDayIndex = cycleDays.indexOf(day)
const relevantDays = cycleDays
.slice(cycleDayIndex + 1, tempEvalEndIndex + 1)
.filter(day => day.cervix && !day.cervix.exclude)
const onlyClosedAndHardUntilEndOfTempEval = relevantDays.every(day => {
return isClosedAndHard(day.cervix)
})
if (onlyClosedAndHardUntilEndOfTempEval) {
return {
detected: true,
cervixPeakBeforeShift: day,
evaluationCompleteDay: threeFollowingDays[threeFollowingDays.length - 1]
}
}
}
return notDetected
}
function isClosedAndHard (cervixDay) {
return cervixDay.opening === 0 && cervixDay.firmness === 0
}
+44 -22
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@@ -1,11 +1,12 @@
import getTemperatureShift from './temperature'
import getMucusShift from './mucus'
import getCervixShift from './cervix'
import getPreOvulatoryPhase from './pre-ovulatory'
import { LocalDate } from 'js-joda'
import assert from 'assert'
export default function getSymptoThermalStatus(cycles) {
const { cycle, previousCycle, earlierCycles = [] } = cycles
export default function getSymptoThermalStatus(cycleInfo) {
const { cycle, previousCycle, earlierCycles = [], secondarySymptom = 'mucus' } = cycleInfo
throwIfArgsAreNotInRequiredFormat([cycle, ...earlierCycles])
const status = {
@@ -15,7 +16,10 @@ export default function getSymptoThermalStatus(cycles) {
// if there was no first higher measurement in the previous cycle,
// no infertile pre-ovulatory phase may be assumed
if (previousCycle) {
const statusForLast = getSymptoThermalStatus({ cycle: previousCycle })
const statusForLast = getSymptoThermalStatus({
cycle: previousCycle,
secondarySymptom: secondarySymptom
})
if (statusForLast.temperatureShift) {
const preOvuPhase = getPreOvulatoryPhase(
cycle,
@@ -48,20 +52,28 @@ export default function getSymptoThermalStatus(cycles) {
}
const temperatureShift = getTemperatureShift(cycle)
if (!temperatureShift.detected) return status
const tempEvalEndIndex = cycle.indexOf(temperatureShift.evaluationCompleteDay)
const mucusShift = getMucusShift(cycle, tempEvalEndIndex)
if (!mucusShift.detected) return status
let secondaryShift
if (secondarySymptom === 'mucus') {
secondaryShift = getMucusShift(cycle, tempEvalEndIndex)
} else if (secondarySymptom === 'cervix') {
secondaryShift = getCervixShift(cycle, tempEvalEndIndex)
}
if (!secondaryShift.detected) return status
let periOvulatoryEnd
const tempOver = temperatureShift.evaluationCompleteDay.date
const mucusOver = mucusShift.evaluationCompleteDay.date
const secondarySymptomOver = secondaryShift.evaluationCompleteDay.date
if (tempOver > mucusOver) {
if (tempOver >= secondarySymptomOver) {
periOvulatoryEnd = temperatureShift.evaluationCompleteDay
} else {
periOvulatoryEnd = mucusShift.evaluationCompleteDay
} else if (secondarySymptom > tempOver) {
periOvulatoryEnd = secondaryShift.evaluationCompleteDay
}
const previousPeriDays = periPhase.cycleDays
@@ -78,7 +90,12 @@ export default function getSymptoThermalStatus(cycles) {
periPhase.cycleDays = previousPeriDays.slice(0, previousPeriEndIndex + 1)
periPhase.end = status.phases.postOvulatory.start
status.mucusShift = mucusShift
if (secondarySymptom === 'mucus') {
status.mucusShift = secondaryShift
} else if (secondarySymptom === 'cervix') {
status.cervixShift = secondaryShift
}
status.temperatureShift = temperatureShift
return status
@@ -86,18 +103,23 @@ export default function getSymptoThermalStatus(cycles) {
function throwIfArgsAreNotInRequiredFormat(cycles) {
cycles.forEach(cycle => {
assert.ok(Array.isArray(cycle))
assert.ok(cycle.length > 0)
assert.ok(cycle[0].bleeding !== null)
assert.equal(typeof cycle[0].bleeding, 'object')
assert.equal(typeof cycle[0].bleeding.value, 'number')
assert.ok(Array.isArray(cycle), "Cycles must be arrays.")
assert.ok(cycle.length > 0, "Cycle must not be empty.")
assert.ok(cycle[0].bleeding !== null, "First cycle day should have bleeding.")
assert.equal(typeof cycle[0].bleeding, 'object', "First cycle day must contain bleeding value.")
assert.equal(typeof cycle[0].bleeding.value, 'number', "First cycle day bleeding value must be a number.")
cycle.forEach(day => {
assert.equal(typeof day.date, 'string')
assert.doesNotThrow(() => LocalDate.parse(day.date))
if (day.temperature) assert.equal(typeof day.temperature.value, 'number')
if (day.mucus) assert.equal(typeof day.mucus.value, 'number')
if (day.mucus) assert.ok(day.mucus.value >= 0)
if (day.mucus) assert.ok(day.mucus.value < 5)
assert.equal(typeof day.date, 'string', "Date must be given as a string.")
assert.doesNotThrow(() => LocalDate.parse(day.date), "Date must be given in right string format.")
if (day.temperature) assert.equal(typeof day.temperature.value, 'number', "Temperature value must be a number.")
if (day.mucus) assert.equal(typeof day.mucus.value, 'number', "Mucus value must be a number.")
if (day.mucus) assert.ok(day.mucus.value >= 0, "Mucus value must greater or equal to 0.")
if (day.mucus) assert.ok(day.mucus.value <= 4, "Mucus value must be below 5.")
if (day.cervix) assert.ok(day.cervix.opening >= 0, "Cervix opening value must be 0 or bigger")
if (day.cervix) assert.ok(day.cervix.opening <= 2, "Cervix opening value must be 2 or smaller")
if (day.cervix) assert.ok(day.cervix.firmness >= 0, "Cervix firmness value must be 0 or bigger")
if (day.cervix) assert.ok(day.cervix.firmness <= 1, "Cervix firmness value must be 1 or smaller")
assert.equal(typeof cycle[0].bleeding.value, 'number', "Bleeding value must be a number")
})
})
}
}
+12 -8
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@@ -12,8 +12,8 @@ export default function(cycle, previousCycles) {
const maybePreOvuDays = cycle.slice(0, preOvuPhaseLength).filter(d => {
return d.date <= preOvuEndDate
})
const preOvulatoryDays = getDaysUntilFertileMucus(maybePreOvuDays)
// if mucus occurs on the 1st cycle day, there is no pre-ovu phase
const preOvulatoryDays = getDaysUntilFertileSecondarySymptom(maybePreOvuDays)
// if fertile mucus or cervix occurs on the 1st cycle day, there is no pre-ovu phase
if (!preOvulatoryDays.length) return null
let endDate
@@ -34,13 +34,17 @@ export default function(cycle, previousCycles) {
}
}
function getDaysUntilFertileMucus(days) {
const firstFertileMucusDayIndex = days.findIndex(day => {
return day.mucus && day.mucus.value > 1
function getDaysUntilFertileSecondarySymptom(days, secondarySymptom = 'mucus') {
const firstFertileSecondarySymptomDayIndex = days.findIndex(day => {
if (secondarySymptom === 'mucus') {
return day.mucus && day.mucus.value > 1
} else if (secondarySymptom === 'cervix') {
return day.cervix && !day.cervix.isClosedAndHard
}
})
if (firstFertileMucusDayIndex > -1) {
return days.slice(0, firstFertileMucusDayIndex)
if (firstFertileSecondarySymptomDayIndex > -1) {
return days.slice(0, firstFertileSecondarySymptomDayIndex)
}
return days
}
}
+18 -18
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@@ -39,18 +39,18 @@ function checkIfFirstHighMeasurement(temp, i, temperatureDays, ltl) {
if (i > temperatureDays.length - 3) {
return { detected: false }
}
const nextDays = temperatureDays.slice(i + 1, i + 4)
const nextDaysAfterPotentialFhm = temperatureDays.slice(i + 1, i + 4)
return (
getResultForRegularRule(nextDays, ltl)) ||
getResultForFirstExceptionRule(nextDays, ltl) ||
getResultForSecondExceptionRule(nextDays, ltl) ||
getResultForRegularRule(nextDaysAfterPotentialFhm, ltl)) ||
getResultForFirstExceptionRule(nextDaysAfterPotentialFhm, ltl) ||
getResultForSecondExceptionRule(nextDaysAfterPotentialFhm, ltl) ||
{ detected: false }
}
function getResultForRegularRule(nextDays, ltl) {
if (!nextDays.every(day => day.temp > ltl)) return false
const thirdDay = nextDays[1]
function getResultForRegularRule(nextDaysAfterPotentialFhm, ltl) {
if (!nextDaysAfterPotentialFhm.every(day => day.temp > ltl)) return false
const thirdDay = nextDaysAfterPotentialFhm[1]
if (rounded(thirdDay.temp - ltl, 0.1) < 0.2) return false
return {
detected: true,
@@ -60,10 +60,10 @@ function getResultForRegularRule(nextDays, ltl) {
}
}
function getResultForFirstExceptionRule(nextDays, ltl) {
if (nextDays.length < 3) return false
if (!nextDays.every(day => day.temp > ltl)) return false
const fourthDay = nextDays[2]
function getResultForFirstExceptionRule(nextDaysAfterPotentialFhm, ltl) {
if (nextDaysAfterPotentialFhm.length < 3) return false
if (!nextDaysAfterPotentialFhm.every(day => day.temp > ltl)) return false
const fourthDay = nextDaysAfterPotentialFhm[2]
if (fourthDay.temp <= ltl) return false
return {
detected: true,
@@ -73,10 +73,10 @@ function getResultForFirstExceptionRule(nextDays, ltl) {
}
}
function getResultForSecondExceptionRule(nextDays, ltl) {
if (nextDays.length < 3) return false
if (secondOrThirdTempIsAtOrBelowLtl(nextDays, ltl)) {
const fourthDay = nextDays[2]
function getResultForSecondExceptionRule(nextDaysAfterPotentialFhm, ltl) {
if (nextDaysAfterPotentialFhm.length < 3) return false
if (secondOrThirdTempIsAtOrBelowLtl(nextDaysAfterPotentialFhm, ltl)) {
const fourthDay = nextDaysAfterPotentialFhm[2]
if (rounded(fourthDay.temp - ltl, 0.1) >= 0.2) {
return {
detected: true,
@@ -89,9 +89,9 @@ function getResultForSecondExceptionRule(nextDays, ltl) {
return false
}
function secondOrThirdTempIsAtOrBelowLtl(nextDays, ltl) {
const secondIsLow = nextDays[0].temp <= ltl
const thirdIsLow = nextDays[1].temp <= ltl
function secondOrThirdTempIsAtOrBelowLtl(nextDaysAfterPotentialFhm, ltl) {
const secondIsLow = nextDaysAfterPotentialFhm[0].temp <= ltl
const thirdIsLow = nextDaysAfterPotentialFhm[1].temp <= ltl
if ((secondIsLow || thirdIsLow) && !(secondIsLow && thirdIsLow)) {
return true
} else {
+188
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@@ -0,0 +1,188 @@
function convertToSymptoFormat(val) {
const sympto = { date: val.date }
if (val.temperature) sympto.temperature = {
value: val.temperature,
exclude: false
}
if (val.cervix && typeof val.cervix.opening === 'number' && typeof val.cervix.firmness === 'number') sympto.cervix = {
opening: val.cervix.opening,
firmness: val.cervix.firmness,
exclude: false
}
if (val.bleeding) sympto.bleeding = {
value: val.bleeding,
exclude: false
}
return sympto
}
export const cervixShiftAndFhmOnSameDay = [
{ date: '2018-08-01', bleeding: 1, cervix: { opening: 1, firmness: 1 } },
{ date: '2018-08-02', bleeding: 2, cervix: { opening: 1, firmness: 1 } },
{ date: '2018-08-03', temperature: 36.6, bleeding: 2, cervix: { opening: 2, firmness: 1 } },
{ date: '2018-08-04', temperature: 36.55, bleeding: 1, cervix: { opening: 2, firmness: 0 } },
{ date: '2018-08-05', temperature: 36.6, cervix: { opening: 0, firmness: 1 } },
{ date: '2018-08-06', temperature: 36.65, cervix: { opening: 0, firmness: 1 } },
{ date: '2018-08-07', temperature: 36.71, cervix: { opening: 1, firmness: 0 } },
{ date: '2018-08-08', temperature: 36.69, cervix: { opening: 1, firmness: 0 } },
{ date: '2018-08-09', temperature: 36.64, cervix: { opening: 1, firmness: 1 } },
{ date: '2018-08-10', temperature: 36.66, cervix: { opening: 1, firmness: 1 } },
{ date: '2018-08-11', temperature: 36.61, cervix: { opening: 1, firmness: 0 } },
{ date: '2018-08-12', temperature: 36.6, cervix: { opening: 0, firmness: 1 } },
{ date: '2018-08-13', temperature: 36.8, cervix: { opening: 0, firmness: 0 } },
{ date: '2018-08-14', temperature: 36.85, cervix: { opening: 0, firmness: 0 } },
{ date: '2018-08-15', temperature: 36.9, cervix: { opening: 0, firmness: 0 } },
{ date: '2018-08-16', temperature: 36.95, cervix: { opening: 0, firmness: 0 } },
{ date: '2018-08-17', temperature: 36.95, cervix: { opening: 0, firmness: 0 } }
].map(convertToSymptoFormat)
export const cycleWithFhmNoCervixShift = [
{ date: '2018-08-01', bleeding: 1 },
{ date: '2018-08-02', bleeding: 2 },
{ date: '2018-08-03', temperature: 36.6, bleeding: 2 },
{ date: '2018-08-04', temperature: 36.55, bleeding: 1 },
{ date: '2018-08-05', temperature: 36.6 },
{ date: '2018-08-06', temperature: 36.65, cervix: { opening: 0, firmness: 1 } },
{ date: '2018-08-07', temperature: 36.7, cervix: { opening: 1, firmness: 0 } },
{ date: '2018-08-08', temperature: 36.6, cervix: { opening: 0, firmness: 1 } },
{ date: '2018-08-09', temperature: 36.8, cervix: { opening: 0, firmness: 0 } },
{ date: '2018-08-10', temperature: 36.85, cervix: { opening: 2, firmness: 0 } },
{ date: '2018-08-11', temperature: 36.9, cervix: { opening: 1, firmness: 0 } },
{ date: '2018-08-12', temperature: 36.95, cervix: { opening: 0, firmness: 1 } },
{ date: '2018-08-13', temperature: 36.95, cervix: { opening: 0, firmness: 0 } }
].map(convertToSymptoFormat)
export const cycleWithoutFhmNoCervixShift = [
{ date: '2018-06-02', temperature: 36.6, bleeding: 2 },
{ date: '2018-06-03', temperature: 36.65 },
{ date: '2018-06-04', temperature: 36.6 },
{ date: '2018-06-05', temperature: 36.55 },
{ date: '2018-06-06', temperature: 36.7, cervix: { opening: 0, firmness: 0 } },
{ date: '2018-06-09', temperature: 36.8 },
{ date: '2018-06-10', temperature: 36.9, cervix: { opening: 2, firmness: 0 } },
{ date: '2018-06-13', temperature: 36.9, cervix: { opening: 1, firmness: 1 } }
].map(convertToSymptoFormat)
export const longCycleWithoutAnyShifts = [
{ date: '2018-07-01', temperature: 36.65, bleeding: 1 },
{ date: '2018-07-02', temperature: 36.45 },
{ date: '2018-07-03', temperature: 36.65 },
{ date: '2018-07-04', temperature: 36.65 },
{ date: '2018-07-05', temperature: 36.65, cervix: { opening: 0, firmness: 0 } },
{ date: '2018-07-06', temperature: 36.85, cervix: { opening: 0, firmness: 1 } },
{ date: '2018-07-07', temperature: 36.65, cervix: { opening: 1, firmness: 1 } },
{ date: '2018-07-08', temperature: 36.65, cervix: { opening: 2, firmness: 1 } },
{ date: '2018-07-09', temperature: 36.65, cervix: { opening: 2, firmness: 1 } },
{ date: '2018-07-10', temperature: 36.65, cervix: { opening: 1, firmness: 1 } },
{ date: '2018-07-11', temperature: 36.35, cervix: { opening: 0, firmness: 0 } },
{ date: '2018-07-12', temperature: 36.65, cervix: { opening: 0, firmness: 0 } },
{ date: '2018-07-13', temperature: 36.25, cervix: { opening: 1, firmness: 1 } },
{ date: '2018-07-14', temperature: 36.65, cervix: { opening: 1, firmness: 1 } },
{ date: '2018-07-15', temperature: 36.65, cervix: { opening: 2, firmness: 0 } },
{ date: '2018-07-16', temperature: 36.15, cervix: { opening: 2, firmness: 1 } },
{ date: '2018-07-17', temperature: 36.65, cervix: { opening: 0, firmness: 1 } },
{ date: '2018-07-18', temperature: 36.25, cervix: { opening: 2, firmness: 1 } },
{ date: '2018-07-19', temperature: 36.65, cervix: { opening: 1, firmness: 1 } },
{ date: '2018-07-20', temperature: 36.45, cervix: { opening: 1, firmness: 1 } },
{ date: '2018-07-21', temperature: 36.52, cervix: { opening: 0, firmness: 0 } },
{ date: '2018-07-22', temperature: 36.65, cervix: { opening: 1, firmness: 1 } },
{ date: '2018-07-23', temperature: 36.75, cervix: { opening: 1, firmness: 1 } },
{ date: '2018-07-24', temperature: 36.65, cervix: { opening: 1, firmness: 1 } },
{ date: '2018-07-25', temperature: 36.65, cervix: { opening: 0, firmness: 1 } },
{ date: '2018-07-26', temperature: 36.65, cervix: { opening: 2, firmness: 1 } },
].map(convertToSymptoFormat)
export const longAndComplicatedCycle = [
{ date: '2018-06-01', temperature: 36.6, bleeding: 2 },
{ date: '2018-06-02', temperature: 36.65 },
{ date: '2018-06-04', temperature: 36.6 },
{ date: '2018-06-05', temperature: 36.55 },
{ date: '2018-06-06', temperature: 36.7, cervix: { opening: 0, firmness: 0 } },
{ date: '2018-06-09', temperature: 36.5, cervix: { opening: 2, firmness: 1 } },
{ date: '2018-06-10', temperature: 36.4, cervix: { opening: 2, firmness: 1 } },
{ date: '2018-06-13', temperature: 36.45, cervix: { opening: 1, firmness: 1 } },
{ date: '2018-06-14', temperature: 36.5, cervix: { opening: 1, firmness: 1 } },
{ date: '2018-06-15', temperature: 36.55, cervix: { opening: 1, firmness: 1 } },
{ date: '2018-06-16', temperature: 36.7, cervix: { opening: 2, firmness: 1 } },
{ date: '2018-06-17', temperature: 36.65, cervix: { opening: 2, firmness: 1 } },
{ date: '2018-06-18', temperature: 36.75, cervix: { opening: 1, firmness: 1 } },
{ date: '2018-06-19', temperature: 36.8, cervix: { opening: 0, firmness: 0 } },
{ date: '2018-06-20', temperature: 36.85, cervix: { opening: 1, firmness: 1 } },
{ date: '2018-06-21', temperature: 36.8, cervix: { opening: 1, firmness: 1 } },
{ date: '2018-06-22', temperature: 36.9, cervix: { opening: 2, firmness: 1 } },
{ date: '2018-06-25', temperature: 36.9, cervix: { opening: 0, firmness: 0 } },
{ date: '2018-06-26', temperature: 36.8, cervix: { opening: 0, firmness: 0 } },
{ date: '2018-06-27', temperature: 36.9, cervix: { opening: 0, firmness: 0 } }
].map(convertToSymptoFormat)
export const tempShift3DaysAfterCervixShift = [
{ date: '2018-05-08', bleeding: 3 },
{ date: '2018-05-09', bleeding: 2 },
{ date: '2018-05-10', bleeding: 2 },
{ date: '2018-05-11', bleeding: 1 },
{ date: '2018-05-12', temperature: 36.3 },
{ date: '2018-05-13', temperature: 36.4, cervix: { opening: 1, firmness: 1 } },
{ date: '2018-05-14', temperature: 36.3, cervix: { opening: 1, firmness: 1 } },
{ date: '2018-05-15', temperature: 36.2, cervix: { opening: 1, firmness: 1 } },
{ date: '2018-05-16', temperature: 36.3, cervix: { opening: 0, firmness: 0 } },
{ date: '2018-05-17', temperature: 36.3, cervix: { opening: 0, firmness: 0 } },
{ date: '2018-05-18', temperature: 36.35, cervix: { opening: 0, firmness: 0 } },
{ date: '2018-05-19', temperature: 36.65, cervix: { opening: 0, firmness: 0 } },
{ date: '2018-05-20', temperature: 36.7, cervix: { opening: 0, firmness: 0 } },
{ date: '2018-05-21', temperature: 36.6, cervix: { opening: 0, firmness: 0 } },
{ date: '2018-05-22', temperature: 36.85, cervix: { opening: 0, firmness: 0 } },
{ date: '2018-05-23', temperature: 36.8, cervix: { opening: 1, firmness: 0 } },
{ date: '2018-05-24', temperature: 36.85, cervix: { opening: 0, firmness: 0 } },
{ date: '2018-05-25', temperature: 36.95, cervix: { opening: 0, firmness: 0 } },
{ date: '2018-05-26', temperature: 36.85, cervix: { opening: 0, firmness: 1 } },
{ date: '2018-05-27', temperature: 36.8, cervix: { opening: 1, firmness: 0 } },
{ date: '2018-05-28', temperature: 36.6, cervix: { opening: 1, firmness: 0 } },
{ date: '2018-05-29', bleeding: 2 }
].map(convertToSymptoFormat)
export const cervixShift2DaysAfterTempShift = [
{ date: '2018-04-05', bleeding: 3 },
{ date: '2018-04-06', bleeding: 2 },
{ date: '2018-04-07', bleeding: 2 },
{ date: '2018-04-08', bleeding: 1 },
{ date: '2018-04-09', temperature: 36.5 },
{ date: '2018-04-10', temperature: 36.5, cervix: { opening: 1, firmness: 1 } },
{ date: '2018-04-11', temperature: 36.55, cervix: { opening: 1, firmness: 1 } },
{ date: '2018-04-12', temperature: 36.5, cervix: { opening: 1, firmness: 1 } },
{ date: '2018-04-13', temperature: 36.35, cervix: { opening: 1, firmness: 1 } },
{ date: '2018-04-14', temperature: 36.35, cervix: { opening: 1, firmness: 1 } },
{ date: '2018-04-15', temperature: 36.6, cervix: { opening: 1, firmness: 1 } },
{ date: '2018-04-16', temperature: 36.8, cervix: { opening: 1, firmness: 1 } },
{ date: '2018-04-17', temperature: 36.8, cervix: { opening: 0, firmness: 0 } },
{ date: '2018-04-18', temperature: 36.8, cervix: { opening: 0, firmness: 0 } },
{ date: '2018-04-19', temperature: 36.85, cervix: { opening: 0, firmness: 0 } },
{ date: '2018-04-20', temperature: 37.0, cervix: { opening: 0, firmness: 0 } },
{ date: '2018-04-22', temperature: 36.9, cervix: { opening: 0, firmness: 0 } },
{ date: '2018-04-23', temperature: 37.1, cervix: { opening: 0, firmness: 0 } },
{ date: '2018-04-24', temperature: 36.75, cervix: { opening: 0, firmness: 0 } }
].map(convertToSymptoFormat)
export const noOvulationDetected = [
{ date: '2018-03-08', bleeding: 3 },
{ date: '2018-03-09', bleeding: 3 },
{ date: '2018-03-10', bleeding: 3 },
{ date: '2018-03-11', bleeding: 3 },
{ date: '2018-03-12', temperature: 36.3, cervix: { opening: 0, firmness: 0 } },
{ date: '2018-03-13', temperature: 36.5, cervix: { opening: 1, firmness: 1 } },
{ date: '2018-03-14', temperature: 36.45, cervix: { opening: 1, firmness: 1 } },
{ date: '2018-03-15', temperature: 36.4, cervix: { opening: 1, firmness: 1 } },
{ date: '2018-03-16', temperature: 36.2, cervix: { opening: 1, firmness: 1 } },
{ date: '2018-03-17', temperature: 36.5, cervix: { opening: 1, firmness: 1 } },
{ date: '2018-03-18', temperature: 36.6, cervix: { opening: 1, firmness: 1 } },
{ date: '2018-03-19', temperature: 36.35, cervix: { opening: 1, firmness: 0 } },
{ date: '2018-03-20', temperature: 36.8, cervix: { opening: 0, firmness: 0 } },
{ date: '2018-03-21', temperature: 36.7, cervix: { opening: 0, firmness: 0 } },
{ date: '2018-03-22', temperature: 36.7, cervix: { opening: 0, firmness: 1 } },
{ date: '2018-03-23', temperature: 36.7, cervix: { opening: 0, firmness: 0 } }
].map(convertToSymptoFormat)
export const fiveDayCycle = [
{ date: '2018-08-01', bleeding: 2 },
{ date: '2018-08-03', bleeding: 3 }
].map(convertToSymptoFormat)
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import chai from 'chai'
import getSensiplanStatus from '../../lib/sympto'
import {
cervixShiftAndFhmOnSameDay,
cycleWithFhmNoCervixShift,
cycleWithoutFhm,
longCycleWithoutAnyShifts,
tempShift3DaysAfterCervixShift,
cervixShift2DaysAfterTempShift,
noOvulationDetected,
fiveDayCycle
} from './cervix-temp-fixtures'
const expect = chai.expect
describe('sympto', () => {
describe('combining temperature and cervix tracking', () => {
describe('with no previous higher temp measurement', () => {
it('with no temp or cervix shifts detects only peri-ovulatory', () => {
const status = getSensiplanStatus({
cycle: longCycleWithoutAnyShifts,
previousCycle: cycleWithoutFhm,
secondarySymptom: 'cervix'
})
expect(Object.keys(status.phases).length).to.eql(1)
expect(status).to.eql({
phases: {
periOvulatory: {
start: { date: '2018-07-01' },
cycleDays: longCycleWithoutAnyShifts
}
}
})
})
it('with temp but no cervix shift detects only peri-ovulatory', () => {
const status = getSensiplanStatus({
cycle: cycleWithFhmNoCervixShift,
previousCycle: cycleWithoutFhm,
secondarySymptom: 'cervix'
})
expect(Object.keys(status.phases).length).to.eql(1)
expect(status).to.eql({
phases: {
periOvulatory: {
start: { date: '2018-08-01' },
cycleDays: cycleWithFhmNoCervixShift
}
}
})
})
it('with temp and cervix shifts at the same day an no previous cycle detects only peri- and post-ovulatory phases', () => {
const status = getSensiplanStatus({
cycle: cervixShiftAndFhmOnSameDay,
secondarySymptom: 'cervix'
})
expect(Object.keys(status.phases).length).to.eql(2)
expect(status.temperatureShift.evaluationCompleteDay.date).to.eql('2018-08-15')
expect(status.cervixShift.evaluationCompleteDay.date).to.eql('2018-08-15')
expect(status.temperatureShift.rule).to.eql(0)
expect(status.phases.periOvulatory).to.eql({
start: { date: '2018-08-01' },
end: { date: '2018-08-15', time: '18:00' },
cycleDays: cervixShiftAndFhmOnSameDay
.filter(({date}) => date <= '2018-08-15')
})
expect(status.phases.postOvulatory).to.eql({
start: { date: '2018-08-15', time: '18:00' },
cycleDays: cervixShiftAndFhmOnSameDay
.filter(({date}) => date >= '2018-08-15')
})
})
})
describe('with previous higher temp measurement', () => {
it('with no shifts in 5-day long cycle detects only peri-ovulatory according to 5-day rule', () => {
const status = getSensiplanStatus({
cycle: fiveDayCycle,
previousCycle: cervixShiftAndFhmOnSameDay,
secondarySymptom: 'cervix'
})
expect(Object.keys(status.phases).length).to.eql(1)
expect(status.phases.preOvulatory).to.eql({
cycleDays: fiveDayCycle,
start: { date: '2018-08-01' },
end: { date: '2018-08-05' }
})
})
it('with no shifts in long cycle detects pre- and peri-ovulatory phase according to 5-day-rule', () => {
const status = getSensiplanStatus({
cycle: longCycleWithoutAnyShifts,
previousCycle: cervixShiftAndFhmOnSameDay,
secondarySymptom: 'cervix'
})
expect(Object.keys(status.phases).length).to.eql(2)
expect(status.phases.preOvulatory).to.eql({
cycleDays: longCycleWithoutAnyShifts
.filter(({date}) => date <= '2018-07-05'),
start: { date: '2018-07-01' },
end: { date: '2018-07-05' }
})
expect(status.phases.periOvulatory).to.eql({
cycleDays: longCycleWithoutAnyShifts
.filter(({date}) => date >= '2018-07-06'),
start: { date: '2018-07-06' }
})
})
it('with temperature and cervix evaluation end on same day detects all 3 phases', () => {
const status = getSensiplanStatus({
cycle: cervixShiftAndFhmOnSameDay,
previousCycle: cervixShiftAndFhmOnSameDay,
secondarySymptom: 'cervix'
})
expect(Object.keys(status.phases).length).to.eql(3)
expect(status.temperatureShift.evaluationCompleteDay.date).to.eql('2018-08-15')
expect(status.cervixShift.evaluationCompleteDay.date).to.eql('2018-08-15')
expect(status.phases.preOvulatory).to.eql({
start: { date: '2018-08-01' },
end: { date: '2018-08-05' },
cycleDays: cervixShiftAndFhmOnSameDay
.filter(({date}) => date <= '2018-08-05')
})
expect(status.phases.periOvulatory).to.eql({
start: { date: '2018-08-06' },
end: { date: '2018-08-15', time: '18:00' },
cycleDays: cervixShiftAndFhmOnSameDay
.filter(({date}) => {
return date > '2018-08-05' && date <= '2018-08-15'
})
})
expect(status.phases.postOvulatory).to.eql({
start: { date: '2018-08-15', time: '18:00' },
cycleDays: cervixShiftAndFhmOnSameDay
.filter(({date}) => date >= '2018-08-15')
})
})
it('with temperature shift 3 days after cervix shift detects all 3 phases', () => {
const status = getSensiplanStatus({
cycle: tempShift3DaysAfterCervixShift,
previousCycle: cervixShiftAndFhmOnSameDay,
secondarySymptom: 'cervix'
})
expect(Object.keys(status.phases).length).to.eql(3)
expect(status.cervixShift).to.be.an('object')
expect(status.temperatureShift).to.be.an('object')
expect(status.cervixShift.evaluationCompleteDay.date).to.eql('2018-05-18')
expect(status.temperatureShift.evaluationCompleteDay.date).to.eql('2018-05-21')
expect(status.phases.preOvulatory).to.eql({
start: { date: '2018-05-08' },
end: { date: '2018-05-12' },
cycleDays: tempShift3DaysAfterCervixShift
.filter(({date}) => date <= '2018-05-12')
})
expect(status.phases.periOvulatory).to.eql({
start: { date:'2018-05-13'},
end: { date: '2018-05-21', time: '18:00' },
cycleDays: tempShift3DaysAfterCervixShift
.filter(({date}) => {
return date >= '2018-05-13' && date <= '2018-05-21'
})
})
expect(status.phases.postOvulatory).to.eql({
start: { date: '2018-05-21', time: '18:00' },
cycleDays: tempShift3DaysAfterCervixShift
.filter(({date}) => date >= '2018-05-21')
})
})
it('with cervix shift 2 days after temperature shift detects all 3 phases', () => {
const status = getSensiplanStatus({
cycle: cervixShift2DaysAfterTempShift,
previousCycle: cervixShiftAndFhmOnSameDay,
secondarySymptom: 'cervix'
})
expect(Object.keys(status.phases).length).to.eql(3)
expect(status.temperatureShift.rule).to.eql(0)
expect(status.temperatureShift.evaluationCompleteDay.date).to.eql('2018-04-17')
expect(status.cervixShift.evaluationCompleteDay.date).to.eql('2018-04-19')
expect(status.phases.preOvulatory).to.eql({
cycleDays: cervixShift2DaysAfterTempShift
.filter(({date}) => date <= '2018-04-09'),
start: { date: '2018-04-05' },
end: { date: '2018-04-09' }
})
expect(status.phases.periOvulatory).to.eql({
cycleDays: cervixShift2DaysAfterTempShift
.filter(({date}) => {
return date >= '2018-04-10' && date <= '2018-04-19'
}),
start: { date: '2018-04-10' },
end: { date: '2018-04-19', time: '18:00' }
})
expect(status.phases.postOvulatory).to.eql({
cycleDays: cervixShift2DaysAfterTempShift
.filter(({date}) => date >= '2018-04-19'),
start: { date: '2018-04-19', time: '18:00' }
})
})
it('with no shifts no ovulation is found detects only pre and peri-ovulatory phase', () => {
const status = getSensiplanStatus({
cycle: noOvulationDetected,
previousCycle: cervixShiftAndFhmOnSameDay,
secondarySymptom: 'cervix'
})
expect(Object.keys(status.phases).length).to.eql(2)
expect(status.phases.preOvulatory).to.eql({
cycleDays: noOvulationDetected
.filter(({date}) => date <= '2018-03-12'),
start: { date: '2018-03-08' },
end: { date: '2018-03-12' }
})
expect(status.phases.periOvulatory).to.eql({
cycleDays: noOvulationDetected
.filter(({date}) => date > '2018-03-12'),
start: { date: '2018-03-13' }
})
})
})
})
})
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import chai from 'chai'
import getCervixStatus from '../../lib/sympto/cervix'
const expect = chai.expect
function turnIntoCycleDayObject(value, fakeDate) {
const hardAndClosed = {
opening: 0,
firmness: 0
}
const hardAndOpen = {
opening: 1,
firmness: 0
}
const softAndClosed = {
opening: 0,
firmness: 1
}
const softAndOpen = {
opening: 1,
firmness: 1
}
const cervixStates = [hardAndClosed, hardAndOpen, softAndClosed, softAndOpen]
return {
date: fakeDate,
cervix: {
opening: cervixStates[value].opening,
firmness: cervixStates[value].firmness,
exclude: false
}
}
}
describe('sympto', () => {
describe('detects cervix shift', () => {
it('when shift happens at day 13 with consistent following days of infertile cervix until tempEvalEnd', () => {
const values = [0, 0, 0, 0, 0, 0, 1, 1, 1, 1, 3, 0, 0, 0, 0, 0, 0, 0]
.map(turnIntoCycleDayObject)
const status = getCervixStatus(values, 16)
expect(status).to.eql({
detected: true,
cervixPeakBeforeShift: {
date: 10,
cervix: {
opening: 1,
firmness: 1,
exclude: false
}
},
evaluationCompleteDay: {
date: 13,
cervix: {
opening: 0,
firmness: 0,
exclude: false
}
}
})
})
it('right at the start of cycle days even if later shift happens again because tempEvalEnd happened before second potential shift', () => {
const values = [2, 0, 0, 0, 0, 0, 1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0]
.map(turnIntoCycleDayObject)
const status = getCervixStatus(values, 5)
expect(status).to.eql({
detected: true,
cervixPeakBeforeShift: {
date: 0,
cervix: {
opening: 0,
firmness: 1,
exclude: false
},
},
evaluationCompleteDay: {
date: 3,
cervix: {
opening: 0,
firmness: 0,
exclude: false
}
}
})
})
it('at day 6 although right at the start of cycle days a potential shift happened but because tempEvalEnd happens after second shift', () => {
const values = [2, 0, 0, 0, 0, 0, 1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0]
.map(turnIntoCycleDayObject)
const status = getCervixStatus(values, 10)
expect(status).to.eql({
detected: true,
cervixPeakBeforeShift: {
date: 6,
cervix: {
opening: 1,
firmness: 0,
exclude: false
},
},
evaluationCompleteDay: {
date: 9,
cervix: {
opening: 0,
firmness: 0,
exclude: false
}
}
})
})
it('when the cervix shift is happening after tempEvalEnd', () => {
const values = [1,1,1,1,1,2,3,3,3,3,1,1,1,1,0,0,0,0,0,0,0]
.map(turnIntoCycleDayObject)
const status = getCervixStatus(values, 10)
expect(status).to.eql({
detected: true,
cervixPeakBeforeShift: {
date: 13,
cervix: {
opening: 1,
firmness: 0,
exclude: false
}
},
evaluationCompleteDay: {
date: 16,
cervix: {
opening: 0,
firmness: 0,
exclude: false
}
}
})
})
})
describe('detects no cervix shift', () => {
it('if there are less than 3 days closed and hard cervix', () => {
const values = [0, 0, 0, 1, 1, 1, 2, 0, 3, 3, 3, 1, 1, 1, 0, 0, 2, 0]
.map(turnIntoCycleDayObject)
const status = getCervixStatus(values, 15)
expect(status).to.eql({ detected: false })
})
it('if cycleDays have not enough cervix values to detect valid cervix shift', () => {
const values = [2,0,0]
.map(turnIntoCycleDayObject)
const status = getCervixStatus(values, 17)
expect(status).to.eql({ detected: false })
})
it('if no days indicate fertile cervix which could be cervix peak', () => {
const values = [1, 3, 2, 1, 3, 2, 1, 3, 2, 1, 3, 2, 1, 3, 2, 1]
.map(turnIntoCycleDayObject)
const status = getCervixStatus(values, 12)
expect(status).to.eql({ detected: false })
})
it('if all days indicate infertile cervix values', () => {
const values = [0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0]
.map(turnIntoCycleDayObject)
const status = getCervixStatus(values, 9)
expect(status).to.eql({ detected: false })
})
it('if there are no cervix values', () => {
const values = [].map(turnIntoCycleDayObject)
const status = getCervixStatus(values, 15)
expect(status).to.eql({ detected: false })
})
})
})
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import chai from 'chai'
import getSensiplanStatus from '../../lib/sympto'
import { AssertionError } from 'assert'
import {
cycleWithoutFhm,
longAndComplicatedCycle,
cycleWithTempAndNoMucusShift,
cycleWithFhm,
cycleWithoutAnyShifts,
fiveDayCycle,
cycleWithEarlyMucus,
cycleWithMucusOnFirstDay,
mucusPeakAndFhmOnSameDay,
fhmTwoDaysBeforeMucusPeak,
fhm5DaysAfterMucusPeak,
mucusPeak5DaysAfterFhm,
mucusPeakTwoDaysBeforeFhm,
fhmOnDay12,
fhmOnDay15,
mucusPeakSlightlyBeforeTempShift,
highestMucusQualityAfterEndOfEval
} from './fixtures'
const expect = chai.expect
describe('sympto', () => {
describe('with no previous higher measurement', () => {
it('with no shifts detects only peri-ovulatory', function () {
const status = getSensiplanStatus({
cycle: cycleWithoutAnyShifts,
previousCycle: cycleWithoutFhm
})
expect(status).to.eql({
phases: {
periOvulatory: {
start: { date: '2018-06-01' },
cycleDays: cycleWithoutAnyShifts
}
},
})
})
it('with shifts detects only peri-ovulatory and post-ovulatory', () => {
const status = getSensiplanStatus({
cycle: longAndComplicatedCycle,
previousCycle: cycleWithoutFhm
})
expect(status.temperatureShift).to.be.an('object')
expect(status.mucusShift).to.be.an('object')
expect(Object.keys(status.phases).length).to.eql(2)
expect(status.phases.periOvulatory).to.eql({
start: { date: '2018-06-01' },
end: { date: '2018-06-21', time: '18:00' },
cycleDays: longAndComplicatedCycle
.filter(({date}) => date <= '2018-06-21')
})
expect(status.phases.postOvulatory).to.eql({
start: {
date: '2018-06-21',
time: '18:00'
},
cycleDays: longAndComplicatedCycle
.filter(({date}) => date >= '2018-06-21')
})
})
})
describe('with previous higher measurement', () => {
describe('with no shifts detects pre-ovulatory phase', function () {
it('according to 5-day-rule', function () {
const status = getSensiplanStatus({
cycle: fiveDayCycle,
previousCycle: cycleWithFhm
})
expect(Object.keys(status.phases).length).to.eql(1)
expect(status.phases.preOvulatory).to.eql({
cycleDays: fiveDayCycle,
start: { date: '2018-06-01' },
end: { date: '2018-06-05' }
})
})
})
describe('with no shifts detects pre- and peri-ovulatory phase', () => {
it('according to 5-day-rule', function () {
const status = getSensiplanStatus({
cycle: cycleWithTempAndNoMucusShift,
previousCycle: cycleWithFhm
})
expect(Object.keys(status.phases).length).to.eql(2)
expect(status.phases.preOvulatory).to.eql({
cycleDays: cycleWithTempAndNoMucusShift
.filter(({date}) => date <= '2018-06-05'),
start: { date: '2018-06-01' },
end: { date: '2018-06-05' }
})
expect(status.phases.periOvulatory).to.eql({
cycleDays: cycleWithTempAndNoMucusShift
.filter(({date}) => date > '2018-06-05'),
start: { date: '2018-06-06' }
})
})
it('according to 5-day-rule with shortened pre-phase', function () {
const status = getSensiplanStatus({
cycle: cycleWithEarlyMucus,
previousCycle: cycleWithFhm
})
expect(Object.keys(status.phases).length).to.eql(2)
expect(status.phases.preOvulatory).to.eql({
cycleDays: [cycleWithEarlyMucus[0]],
start: { date: '2018-06-01' },
end: { date: '2018-06-01' }
})
expect(status.phases.periOvulatory).to.eql({
cycleDays: cycleWithEarlyMucus.slice(1),
start: { date: '2018-06-02' }
})
})
})
describe('with shifts detects pre- and peri-ovulatory phase', function () {
it('according to 5-day-rule', function () {
const status = getSensiplanStatus({
cycle: longAndComplicatedCycle,
previousCycle: cycleWithFhm
})
expect(Object.keys(status.phases).length).to.eql(3)
expect(status.phases.preOvulatory).to.eql({
cycleDays: longAndComplicatedCycle
.filter(({date}) => date <= '2018-06-05'),
start: { date: '2018-06-01' },
end: { date: '2018-06-05' }
})
expect(status.phases.periOvulatory).to.eql({
cycleDays: longAndComplicatedCycle
.filter(({date}) => date > '2018-06-05' && date <= '2018-06-21'),
start: { date: '2018-06-06' },
end: { date: '2018-06-21', time: '18:00'}
})
expect(status.phases.postOvulatory).to.eql({
cycleDays: longAndComplicatedCycle
.filter(({date}) => date >= '2018-06-21'),
start: { date: '2018-06-21', time: '18:00'}
})
})
})
})
describe('combining first higher measurment and mucus peak', () => {
it('with fhM + mucus peak on same day finds start of postovu phase', () => {
const status = getSensiplanStatus({
cycle: mucusPeakAndFhmOnSameDay,
previousCycle: cycleWithFhm
})
expect(status.temperatureShift).to.be.an('object')
expect(status.mucusShift).to.be.an('object')
expect(Object.keys(status.phases).length).to.eql(3)
expect(status.phases.preOvulatory).to.eql({
start: { date: '2018-06-01' },
end: { date: '2018-06-05' },
cycleDays: mucusPeakAndFhmOnSameDay
.filter(({date}) => date <= '2018-06-05')
})
expect(status.phases.periOvulatory).to.eql({
start: { date: '2018-06-06' },
end: { date: '2018-06-21', time: '18:00' },
cycleDays: mucusPeakAndFhmOnSameDay
.filter(({date}) => {
return date > '2018-06-05' && date <= '2018-06-21'
})
})
expect(status.phases.postOvulatory).to.eql({
start: {
date: '2018-06-21',
time: '18:00'
},
cycleDays: mucusPeakAndFhmOnSameDay
.filter(({date}) => date >= '2018-06-21')
})
})
it('with fhM 2 days before mucus peak waits for end of mucus eval', () => {
const status = getSensiplanStatus({
cycle: fhmTwoDaysBeforeMucusPeak,
previousCycle: cycleWithFhm
})
expect(status.temperatureShift).to.be.an('object')
expect(status.mucusShift).to.be.an('object')
expect(Object.keys(status.phases).length).to.eql(3)
expect(status.phases.preOvulatory).to.eql({
start: { date: '2018-06-01' },
end: { date: '2018-06-05' },
cycleDays: fhmTwoDaysBeforeMucusPeak
.filter(({date}) => date <= '2018-06-05')
})
expect(status.phases.periOvulatory).to.eql({
start: { date: '2018-06-06' },
end: { date: '2018-06-26', time: '18:00' },
cycleDays: fhmTwoDaysBeforeMucusPeak
.filter(({date}) => {
return date > '2018-06-05' && date <= '2018-06-26'
})
})
expect(status.phases.postOvulatory).to.eql({
start: {
date: '2018-06-26',
time: '18:00'
},
cycleDays: fhmTwoDaysBeforeMucusPeak
.filter(({date}) => date >= '2018-06-26')
})
})
it('another example for mucus peak before temp shift', () => {
const status = getSensiplanStatus({
cycle: mucusPeakSlightlyBeforeTempShift,
previousCycle: cycleWithFhm
})
expect(status.temperatureShift).to.be.an('object')
expect(status.mucusShift).to.be.an('object')
expect(Object.keys(status.phases).length).to.eql(3)
expect(status.phases.preOvulatory).to.eql({
start: { date: '2018-06-01' },
end: { date: '2018-06-05' },
cycleDays: mucusPeakSlightlyBeforeTempShift
.filter(({date}) => date <= '2018-06-05')
})
expect(status.phases.periOvulatory).to.eql({
start: { date: '2018-06-06' },
end: { date: '2018-06-17', time: '18:00' },
cycleDays: mucusPeakSlightlyBeforeTempShift
.filter(({date}) => {
return date > '2018-06-05' && date <= '2018-06-17'
})
})
expect(status.phases.postOvulatory).to.eql({
start: {
date: '2018-06-17',
time: '18:00'
},
cycleDays: mucusPeakSlightlyBeforeTempShift
.filter(({date}) => date >= '2018-06-17')
})
})
it('with another mucus peak 5 days after fHM ignores it', () => {
const status = getSensiplanStatus({
cycle: mucusPeak5DaysAfterFhm,
previousCycle: cycleWithFhm
})
expect(status.temperatureShift).to.be.an('object')
expect(status.mucusShift).to.be.an('object')
expect(Object.keys(status.phases).length).to.eql(3)
expect(status.phases.preOvulatory).to.eql({
start: { date: '2018-06-01' },
end: { date: '2018-06-01' },
cycleDays: mucusPeak5DaysAfterFhm
.filter(({date}) => date <= '2018-06-01')
})
expect(status.phases.periOvulatory).to.eql({
start: { date: '2018-06-02' },
end: { date: '2018-06-22', time: '18:00' },
cycleDays: mucusPeak5DaysAfterFhm
.filter(({date}) => {
return date > '2018-06-01' && date <= '2018-06-22'
})
})
expect(status.phases.postOvulatory).to.eql({
start: {
date: '2018-06-22',
time: '18:00'
},
cycleDays: mucusPeak5DaysAfterFhm
.filter(({date}) => date >= '2018-06-22')
})
})
it('with mucus peak 2 days before fhM waits for end of temp eval', () => {
const status = getSensiplanStatus({
cycle: mucusPeakTwoDaysBeforeFhm,
previousCycle: cycleWithFhm
})
expect(status.temperatureShift).to.be.an('object')
expect(status.mucusShift).to.be.an('object')
expect(Object.keys(status.phases).length).to.eql(3)
expect(status.phases.preOvulatory).to.eql({
start: { date: '2018-06-01' },
end: { date: '2018-06-04' },
cycleDays: mucusPeakTwoDaysBeforeFhm
.filter(({date}) => date <= '2018-06-04')
})
expect(status.phases.periOvulatory).to.eql({
start: { date: '2018-06-05' },
end: { date: '2018-07-03', time: '18:00' },
cycleDays: mucusPeakTwoDaysBeforeFhm
.filter(({date}) => {
return date > '2018-06-04' && date <= '2018-07-03'
})
})
expect(status.phases.postOvulatory).to.eql({
start: {
date: '2018-07-03',
time: '18:00'
},
cycleDays: mucusPeakTwoDaysBeforeFhm
.filter(({date}) => date >= '2018-07-03')
})
})
it('with mucus peak 5 days before fhM waits for end of temp eval', () => {
const status = getSensiplanStatus({
cycle: fhm5DaysAfterMucusPeak,
previousCycle: cycleWithFhm
})
expect(status.temperatureShift).to.be.an('object')
expect(status.mucusShift).to.be.an('object')
expect(Object.keys(status.phases).length).to.eql(3)
expect(status.phases.preOvulatory).to.eql({
start: { date: '2018-06-01' },
end: { date: '2018-06-05' },
cycleDays: fhm5DaysAfterMucusPeak
.filter(({date}) => date <= '2018-06-05')
})
expect(status.phases.periOvulatory).to.eql({
start: { date: '2018-06-06' },
end: { date: '2018-06-21', time: '18:00' },
cycleDays: fhm5DaysAfterMucusPeak
.filter(({date}) => {
return date > '2018-06-05' && date <= '2018-06-21'
})
})
expect(status.phases.postOvulatory).to.eql({
start: {
date: '2018-06-21',
time: '18:00'
},
cycleDays: fhm5DaysAfterMucusPeak
.filter(({date}) => date >= '2018-06-21')
})
})
it('with highest quality after end of eval', () => {
const status = getSensiplanStatus({
cycle: highestMucusQualityAfterEndOfEval,
previousCycle: cycleWithFhm
})
expect(status.temperatureShift).to.be.an('object')
expect(status.mucusShift).to.be.an('object')
expect(Object.keys(status.phases).length).to.eql(3)
expect(status.phases.preOvulatory).to.eql({
start: { date: '2018-06-01' },
end: { date: '2018-06-05' },
cycleDays: highestMucusQualityAfterEndOfEval
.filter(({date}) => date <= '2018-06-05')
})
expect(status.phases.periOvulatory).to.eql({
start: { date: '2018-06-06' },
end: { date: '2018-06-17', time: '18:00' },
cycleDays: highestMucusQualityAfterEndOfEval
.filter(({date}) => {
return date > '2018-06-05' && date <= '2018-06-17'
})
})
expect(status.phases.postOvulatory).to.eql({
start: {
date: '2018-06-17',
time: '18:00'
},
cycleDays: highestMucusQualityAfterEndOfEval
.filter(({date}) => date >= '2018-06-17')
})
})
})
describe('applying the minus-8 rule', () => {
it('shortens the pre-ovu phase if there is a previous <13 fhm', () => {
const status = getSensiplanStatus({
cycle: longAndComplicatedCycle,
previousCycle: fhmOnDay15,
earlierCycles: [fhmOnDay12, ...Array(10).fill(fhmOnDay15)]
})
expect(status.temperatureShift).to.be.an('object')
expect(status.mucusShift).to.be.an('object')
expect(Object.keys(status.phases).length).to.eql(3)
expect(status.phases.preOvulatory).to.eql({
start: { date: '2018-06-01' },
end: { date: '2018-06-04' },
cycleDays: longAndComplicatedCycle
.filter(({date}) => date <= '2018-06-04')
})
expect(status.phases.periOvulatory).to.eql({
start: { date: '2018-06-05' },
end: { date: '2018-06-21', time: '18:00' },
cycleDays: longAndComplicatedCycle
.filter(({date}) => {
return date > '2018-06-04' && date <= '2018-06-21'
})
})
expect(status.phases.postOvulatory).to.eql({
start: {
date: '2018-06-21',
time: '18:00'
},
cycleDays: longAndComplicatedCycle
.filter(({date}) => date >= '2018-06-21')
})
})
it('shortens pre-ovu phase with prev <13 fhm even with <12 cycles', () => {
const status = getSensiplanStatus({
cycle: longAndComplicatedCycle,
previousCycle: fhmOnDay12,
earlierCycles: Array(10).fill(fhmOnDay12)
})
expect(status.temperatureShift).to.be.an('object')
expect(status.mucusShift).to.be.an('object')
expect(Object.keys(status.phases).length).to.eql(3)
expect(status.phases.preOvulatory).to.eql({
start: { date: '2018-06-01' },
end: { date: '2018-06-04' },
cycleDays: longAndComplicatedCycle
.filter(({date}) => date <= '2018-06-04')
})
expect(status.phases.periOvulatory).to.eql({
start: { date: '2018-06-05' },
end: { date: '2018-06-21', time: '18:00' },
cycleDays: longAndComplicatedCycle
.filter(({date}) => {
return date > '2018-06-04' && date <= '2018-06-21'
})
})
expect(status.phases.postOvulatory).to.eql({
start: {
date: '2018-06-21',
time: '18:00'
},
cycleDays: longAndComplicatedCycle
.filter(({date}) => date >= '2018-06-21')
})
})
it('shortens the pre-ovu phase if mucus occurs', () => {
const status = getSensiplanStatus({
cycle: cycleWithEarlyMucus,
previousCycle: fhmOnDay12,
earlierCycles: Array(10).fill(fhmOnDay12)
})
expect(Object.keys(status.phases).length).to.eql(2)
expect(status.phases.preOvulatory).to.eql({
start: { date: '2018-06-01' },
end: { date: '2018-06-01' },
cycleDays: cycleWithEarlyMucus
.filter(({date}) => date <= '2018-06-01')
})
expect(status.phases.periOvulatory).to.eql({
start: { date: '2018-06-02' },
cycleDays: cycleWithEarlyMucus
.filter(({date}) => {
return date > '2018-06-01'
})
})
})
it('shortens the pre-ovu phase if mucus occurs even on the first day', () => {
const status = getSensiplanStatus({
cycle: cycleWithMucusOnFirstDay,
previousCycle: fhmOnDay12,
earlierCycles: Array(10).fill(fhmOnDay12)
})
expect(Object.keys(status.phases).length).to.eql(1)
expect(status.phases.periOvulatory).to.eql({
start: { date: '2018-06-01' },
cycleDays: cycleWithMucusOnFirstDay
})
})
it('lengthens the pre-ovu phase if >= 12 cycles with fhm > 13', () => {
const status = getSensiplanStatus({
cycle: longAndComplicatedCycle,
previousCycle: fhmOnDay15,
earlierCycles: Array(11).fill(fhmOnDay15)
})
expect(Object.keys(status.phases).length).to.eql(3)
expect(status.phases.preOvulatory).to.eql({
start: { date: '2018-06-01' },
end: { date: '2018-06-07' },
cycleDays: longAndComplicatedCycle
.filter(({date}) => date <= '2018-06-07')
})
expect(status.phases.periOvulatory).to.eql({
start: { date: '2018-06-08' },
end: { date: '2018-06-21', time: '18:00' },
cycleDays: longAndComplicatedCycle
.filter(({date}) => {
return date > '2018-06-07' && date <= '2018-06-21'
})
})
expect(status.phases.postOvulatory).to.eql({
start: {
date: '2018-06-21',
time: '18:00'
},
cycleDays: longAndComplicatedCycle
.filter(({date}) => date >= '2018-06-21')
})
})
it('does not lengthen the pre-ovu phase if < 12 cycles', () => {
const status = getSensiplanStatus({
cycle: longAndComplicatedCycle,
previousCycle: fhmOnDay15,
earlierCycles: Array(10).fill(fhmOnDay15)
})
expect(Object.keys(status.phases).length).to.eql(3)
expect(status.phases.preOvulatory).to.eql({
start: { date: '2018-06-01' },
end: { date: '2018-06-05' },
cycleDays: longAndComplicatedCycle
.filter(({date}) => date <= '2018-06-05')
})
expect(status.phases.periOvulatory).to.eql({
start: { date: '2018-06-06' },
end: { date: '2018-06-21', time: '18:00' },
cycleDays: longAndComplicatedCycle
.filter(({date}) => {
return date > '2018-06-05' && date <= '2018-06-21'
})
})
expect(status.phases.postOvulatory).to.eql({
start: {
date: '2018-06-21',
time: '18:00'
},
cycleDays: longAndComplicatedCycle
.filter(({date}) => date >= '2018-06-21')
})
})
it('does not detect any pre-ovu phase if prev cycle had no fhm', () => {
const status = getSensiplanStatus({
cycle: longAndComplicatedCycle,
previousCycle: cycleWithoutFhm,
earlierCycles: [...Array(12).fill(fhmOnDay15)]
})
expect(Object.keys(status.phases).length).to.eql(2)
expect(status.phases.periOvulatory).to.eql({
start: { date: '2018-06-01' },
end: { date: '2018-06-21', time: '18:00' },
cycleDays: longAndComplicatedCycle
.filter(({date}) => {
return date >= '2018-06-01' && date <= '2018-06-21'
})
})
expect(status.phases.postOvulatory).to.eql({
start: {
date: '2018-06-21',
time: '18:00'
},
cycleDays: longAndComplicatedCycle
.filter(({date}) => date >= '2018-06-21')
})
})
})
describe('when args are wrong', () => {
it('throws when arg object is not in right format', () => {
const wrongObject = { hello: 'world' }
expect(() => getSensiplanStatus(wrongObject)).to.throw(AssertionError)
})
it('throws if cycle array is empty', () => {
expect(() => getSensiplanStatus({cycle: []})).to.throw(AssertionError)
})
it('throws if cycle days are not in right format', () => {
expect(() => getSensiplanStatus({
cycle: [{
hello: 'world',
bleeding: { value: 0 }
}],
earlierCycles: [[{
date: '1992-09-09',
bleeding: { value: 0 }
}]]
})).to.throw(AssertionError)
expect(() => getSensiplanStatus({
cycle: [{
date: '2018-04-13',
temperature: {value: '35'},
bleeding: { value: 0 }
}],
earlierCycles: [[{
date: '1992-09-09',
bleeding: { value: 0 }
}]]
})).to.throw(AssertionError)
expect(() => getSensiplanStatus({
cycle: [{
date: '09-14-2017',
bleeding: { value: 0 }
}],
earlierCycles: [[{
date: '1992-09-09',
bleeding: { value: 0 }
}]]
})).to.throw(AssertionError)
})
it('throws if first cycle day does not have bleeding value', () => {
expect(() => getSensiplanStatus({
cycle: [{
date: '2017-01-01',
bleeding: {
value: 'medium'
}
}],
earlierCycles: [[
{
date: '2017-09-23',
}
]]
})).to.throw(AssertionError)
})
})
})
@@ -1,9 +1,17 @@
function convertToSymptoFormat(val) {
const sympto = { date: val.date }
if (val.temperature) sympto.temperature = { value: val.temperature }
if (val.mucus) sympto.mucus = { value: val.mucus }
if (val.bleeding) sympto.bleeding = { value: val.bleeding }
if (val.temperature) sympto.temperature = {
value: val.temperature,
exclude: false
}
if (val.mucus) sympto.mucus = {
value: val.mucus,
exclude: false
}
if (val.bleeding) sympto.bleeding = {
value: val.bleeding,
exclude: false
}
return sympto
}
@@ -15,7 +23,7 @@ export const cycleWithFhm = [
{ date: '2018-06-06', temperature: 36.7, mucus: 0 },
{ date: '2018-06-13', temperature: 36.8, mucus: 4 },
{ date: '2018-06-15', temperature: 36.9, mucus: 2 },
{ date: '2018-06-17', temperature: 36.9, mucus: 2 },
{ date: '2018-06-16', temperature: 36.9, mucus: 2 },
{ date: '2018-06-17', temperature: 36.9, mucus: 2 },
{ date: '2018-06-18', temperature: 36.9, mucus: 2 }
].map(convertToSymptoFormat)
@@ -227,6 +235,31 @@ export const mucusPeak5DaysAfterFhm = [
{ date: '2018-07-02', temperature: 36.9, mucus: 1 }
].map(convertToSymptoFormat)
export const highestMucusQualityAfterEndOfEval = [
{ date: '2018-06-01', temperature: 36.6, bleeding: 2 },
{ date: '2018-06-02', temperature: 36.65, mucus: 2 },
{ date: '2018-06-04', temperature: 36.6 },
{ date: '2018-06-05', temperature: 36.55 },
{ date: '2018-06-06', temperature: 36.7, mucus: 0 },
{ date: '2018-06-09', temperature: 36.5, mucus: 1 },
{ date: '2018-06-10', temperature: 36.4, mucus: 2 },
{ date: '2018-06-13', temperature: 36.45, mucus: 3 },
{ date: '2018-06-14', temperature: 36.5, mucus: 3 },
{ date: '2018-06-15', temperature: 36.55, mucus: 3 },
{ date: '2018-06-16', temperature: 36.7, mucus: 3 },
{ date: '2018-06-17', temperature: 36.65, mucus: 3 },
{ date: '2018-06-18', temperature: 36.60, mucus: 2 },
{ date: '2018-06-19', temperature: 36.8, mucus: 3 },
{ date: '2018-06-20', temperature: 36.85, mucus: 3 },
{ date: '2018-06-21', temperature: 36.8, mucus: 3 },
{ date: '2018-06-22', temperature: 36.9, mucus: 1 },
{ date: '2018-06-25', temperature: 36.9, mucus: 1 },
{ date: '2018-06-26', temperature: 36.8, mucus: 1 },
{ date: '2018-06-30', temperature: 36.9, mucus: 1 },
{ date: '2018-07-01', temperature: 36.9, mucus: 4 },
{ date: '2018-07-02', temperature: 36.9, mucus: 1 }
].map(convertToSymptoFormat)
export const fhm5DaysAfterMucusPeak = [
{ date: '2018-06-01', temperature: 36.6, bleeding: 2 },
{ date: '2018-06-02', temperature: 36.65 },
@@ -299,26 +332,3 @@ export const mucusPeakSlightlyBeforeTempShift = [
{ date: '2018-06-21', temperature: 36.8, mucus: 1},
{ date: '2018-06-22', temperature: 36.8, mucus: 1}
].map(convertToSymptoFormat)
export const highestMucusQualityAfterEndOfEval = [
{ date: '2018-06-01', temperature: 36.6, bleeding: 2 },
{ date: '2018-06-02', temperature: 36.65 },
{ date: '2018-06-04', temperature: 36.6 },
{ date: '2018-06-07', temperature: 36.4, mucus: 1 },
{ date: '2018-06-08', temperature: 36.35, mucus: 2},
{ date: '2018-06-09', temperature: 36.4, mucus: 2},
{ date: '2018-06-10', temperature: 36.45, mucus: 2},
{ date: '2018-06-11', temperature: 36.4, mucus: 2},
{ date: '2018-06-12', temperature: 36.45, mucus: 2},
{ date: '2018-06-13', temperature: 36.45, mucus: 3},
{ date: '2018-06-14', temperature: 36.55, mucus: 2},
{ date: '2018-06-15', temperature: 36.6, mucus: 2},
{ date: '2018-06-16', temperature: 36.6, mucus: 2},
{ date: '2018-06-17', temperature: 36.55, mucus: 2},
{ date: '2018-06-18', temperature: 36.6, mucus: 1},
{ date: '2018-06-19', temperature: 36.7, mucus: 4},
{ date: '2018-06-20', temperature: 36.75, mucus: 1},
{ date: '2018-06-21', temperature: 36.8, mucus: 1},
{ date: '2018-06-22', temperature: 36.8, mucus: 1}
].map(convertToSymptoFormat)
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import chai from 'chai'
import getSensiplanStatus from '../../lib/sympto'
import { AssertionError } from 'assert'
import {
cycleWithoutFhm,
longAndComplicatedCycle,
cycleWithTempAndNoMucusShift,
cycleWithFhm,
cycleWithoutAnyShifts,
fiveDayCycle,
cycleWithEarlyMucus,
cycleWithMucusOnFirstDay,
mucusPeakAndFhmOnSameDay,
fhmTwoDaysBeforeMucusPeak,
fhm5DaysAfterMucusPeak,
mucusPeak5DaysAfterFhm,
mucusPeakTwoDaysBeforeFhm,
fhmOnDay12,
fhmOnDay15,
mucusPeakSlightlyBeforeTempShift
} from './mucus-temp-fixtures'
const expect = chai.expect
describe('sympto', () => {
describe('combining temperature and mucus tracking', () => {
describe('with no previous higher temp measurement', () => {
it('with no shifts detects only peri-ovulatory', () => {
const status = getSensiplanStatus({
cycle: cycleWithoutAnyShifts,
previousCycle: cycleWithoutFhm
})
expect(status.phases.periOvulatory).to.eql({
start: { date: '2018-06-01' },
cycleDays: cycleWithoutAnyShifts
})
})
it('with temp and mucus shifts detects only peri-ovulatory and post-ovulatory', () => {
const status = getSensiplanStatus({
cycle: longAndComplicatedCycle,
previousCycle: cycleWithoutFhm
})
expect(status.temperatureShift).to.be.an('object')
expect(status.mucusShift).to.be.an('object')
expect(Object.keys(status.phases).length).to.eql(2)
expect(status.phases.periOvulatory).to.eql({
start: { date: '2018-06-01' },
end: { date: '2018-06-21', time: '18:00' },
cycleDays: longAndComplicatedCycle
.filter(({date}) => date <= '2018-06-21')
})
expect(status.phases.postOvulatory).to.eql({
start: {
date: '2018-06-21',
time: '18:00'
},
cycleDays: longAndComplicatedCycle
.filter(({date}) => date >= '2018-06-21')
})
})
})
describe('with previous higher measurement', () => {
describe('with no shifts detects pre-ovulatory phase', () => {
it('according to 5-day-rule', () => {
const status = getSensiplanStatus({
cycle: fiveDayCycle,
previousCycle: cycleWithFhm
})
expect(Object.keys(status.phases).length).to.eql(1)
expect(status.phases.preOvulatory).to.eql({
cycleDays: fiveDayCycle,
start: { date: '2018-06-01' },
end: { date: '2018-06-05' }
})
})
})
describe('with no shifts detects pre- and peri-ovulatory phase', () => {
it('according to 5-day-rule', () => {
const status = getSensiplanStatus({
cycle: cycleWithTempAndNoMucusShift,
previousCycle: cycleWithFhm
})
expect(Object.keys(status.phases).length).to.eql(2)
expect(status.phases.preOvulatory).to.eql({
cycleDays: cycleWithTempAndNoMucusShift
.filter(({date}) => date <= '2018-06-05'),
start: { date: '2018-06-01' },
end: { date: '2018-06-05' }
})
expect(status.phases.periOvulatory).to.eql({
cycleDays: cycleWithTempAndNoMucusShift
.filter(({date}) => date > '2018-06-05'),
start: { date: '2018-06-06' }
})
})
it('according to 5-day-rule with shortened pre-phase', () => {
const status = getSensiplanStatus({
cycle: cycleWithEarlyMucus,
previousCycle: cycleWithFhm
})
expect(Object.keys(status.phases).length).to.eql(2)
expect(status.phases.preOvulatory).to.eql({
cycleDays: [cycleWithEarlyMucus[0]],
start: { date: '2018-06-01' },
end: { date: '2018-06-01' }
})
expect(status.phases.periOvulatory).to.eql({
cycleDays: cycleWithEarlyMucus.slice(1),
start: { date: '2018-06-02' }
})
})
})
describe('with shifts detects pre- and peri-ovulatory phase', () => {
it('according to 5-day-rule', () => {
const status = getSensiplanStatus({
cycle: longAndComplicatedCycle,
previousCycle: cycleWithFhm
})
expect(Object.keys(status.phases).length).to.eql(3)
expect(status.phases.preOvulatory).to.eql({
cycleDays: longAndComplicatedCycle
.filter(({date}) => date <= '2018-06-05'),
start: { date: '2018-06-01' },
end: { date: '2018-06-05' }
})
expect(status.phases.periOvulatory).to.eql({
cycleDays: longAndComplicatedCycle
.filter(({date}) => date > '2018-06-05' && date <= '2018-06-21'),
start: { date: '2018-06-06' },
end: { date: '2018-06-21', time: '18:00'}
})
expect(status.phases.postOvulatory).to.eql({
cycleDays: longAndComplicatedCycle
.filter(({date}) => date >= '2018-06-21'),
start: { date: '2018-06-21', time: '18:00'}
})
})
})
})
describe('combining first higher measurment and mucus peak', () => {
it('with fhM + mucus peak on same day finds start of postovu phase', () => {
const status = getSensiplanStatus({
cycle: mucusPeakAndFhmOnSameDay,
previousCycle: cycleWithFhm
})
expect(status.temperatureShift).to.be.an('object')
expect(status.mucusShift).to.be.an('object')
expect(Object.keys(status.phases).length).to.eql(3)
expect(status.phases.preOvulatory).to.eql({
start: { date: '2018-06-01' },
end: { date: '2018-06-05' },
cycleDays: mucusPeakAndFhmOnSameDay
.filter(({date}) => date <= '2018-06-05')
})
expect(status.phases.periOvulatory).to.eql({
start: { date: '2018-06-06' },
end: { date: '2018-06-21', time: '18:00' },
cycleDays: mucusPeakAndFhmOnSameDay
.filter(({date}) => {
return date > '2018-06-05' && date <= '2018-06-21'
})
})
expect(status.phases.postOvulatory).to.eql({
start: {
date: '2018-06-21',
time: '18:00'
},
cycleDays: mucusPeakAndFhmOnSameDay
.filter(({date}) => date >= '2018-06-21')
})
})
it('with fhM 2 days before mucus peak waits for end of mucus eval', () => {
const status = getSensiplanStatus({
cycle: fhmTwoDaysBeforeMucusPeak,
previousCycle: cycleWithFhm
})
expect(status.temperatureShift).to.be.an('object')
expect(status.mucusShift).to.be.an('object')
expect(Object.keys(status.phases).length).to.eql(3)
expect(status.phases.preOvulatory).to.eql({
start: { date: '2018-06-01' },
end: { date: '2018-06-05' },
cycleDays: fhmTwoDaysBeforeMucusPeak
.filter(({date}) => date <= '2018-06-05')
})
expect(status.phases.periOvulatory).to.eql({
start: { date: '2018-06-06' },
end: { date: '2018-06-26', time: '18:00' },
cycleDays: fhmTwoDaysBeforeMucusPeak
.filter(({date}) => {
return date > '2018-06-05' && date <= '2018-06-26'
})
})
expect(status.phases.postOvulatory).to.eql({
start: {
date: '2018-06-26',
time: '18:00'
},
cycleDays: fhmTwoDaysBeforeMucusPeak
.filter(({date}) => date >= '2018-06-26')
})
})
it('another example for mucus peak before temp shift', () => {
const status = getSensiplanStatus({
cycle: mucusPeakSlightlyBeforeTempShift,
previousCycle: cycleWithFhm
})
expect(status.temperatureShift).to.be.an('object')
expect(status.mucusShift).to.be.an('object')
expect(Object.keys(status.phases).length).to.eql(3)
expect(status.phases.preOvulatory).to.eql({
start: { date: '2018-06-01' },
end: { date: '2018-06-05' },
cycleDays: mucusPeakSlightlyBeforeTempShift
.filter(({date}) => date <= '2018-06-05')
})
expect(status.phases.periOvulatory).to.eql({
start: { date: '2018-06-06' },
end: { date: '2018-06-17', time: '18:00' },
cycleDays: mucusPeakSlightlyBeforeTempShift
.filter(({date}) => {
return date > '2018-06-05' && date <= '2018-06-17'
})
})
expect(status.phases.postOvulatory).to.eql({
start: {
date: '2018-06-17',
time: '18:00'
},
cycleDays: mucusPeakSlightlyBeforeTempShift
.filter(({date}) => date >= '2018-06-17')
})
})
it('with another mucus peak 5 days after fHM ignores it', () => {
const status = getSensiplanStatus({
cycle: mucusPeak5DaysAfterFhm,
previousCycle: cycleWithFhm
})
expect(status.temperatureShift).to.be.an('object')
expect(status.mucusShift).to.be.an('object')
expect(Object.keys(status.phases).length).to.eql(3)
expect(status.phases.preOvulatory).to.eql({
start: { date: '2018-06-01' },
end: { date: '2018-06-01' },
cycleDays: mucusPeak5DaysAfterFhm
.filter(({date}) => date <= '2018-06-01')
})
expect(status.phases.periOvulatory).to.eql({
start: { date: '2018-06-02' },
end: { date: '2018-06-22', time: '18:00' },
cycleDays: mucusPeak5DaysAfterFhm
.filter(({date}) => {
return date > '2018-06-01' && date <= '2018-06-22'
})
})
expect(status.phases.postOvulatory).to.eql({
start: {
date: '2018-06-22',
time: '18:00'
},
cycleDays: mucusPeak5DaysAfterFhm
.filter(({date}) => date >= '2018-06-22')
})
})
it('with mucus peak 2 days before fhM waits for end of temp eval', () => {
const status = getSensiplanStatus({
cycle: mucusPeakTwoDaysBeforeFhm,
previousCycle: cycleWithFhm
})
expect(status.temperatureShift).to.be.an('object')
expect(status.mucusShift).to.be.an('object')
expect(Object.keys(status.phases).length).to.eql(3)
expect(status.phases.preOvulatory).to.eql({
start: { date: '2018-06-01' },
end: { date: '2018-06-04' },
cycleDays: mucusPeakTwoDaysBeforeFhm
.filter(({date}) => date <= '2018-06-04')
})
expect(status.phases.periOvulatory).to.eql({
start: { date: '2018-06-05' },
end: { date: '2018-07-03', time: '18:00' },
cycleDays: mucusPeakTwoDaysBeforeFhm
.filter(({date}) => {
return date > '2018-06-04' && date <= '2018-07-03'
})
})
expect(status.phases.postOvulatory).to.eql({
start: {
date: '2018-07-03',
time: '18:00'
},
cycleDays: mucusPeakTwoDaysBeforeFhm
.filter(({date}) => date >= '2018-07-03')
})
})
it('with mucus peak 5 days before fhM waits for end of temp eval', () => {
const status = getSensiplanStatus({
cycle: fhm5DaysAfterMucusPeak,
previousCycle: cycleWithFhm
})
expect(status.temperatureShift).to.be.an('object')
expect(status.mucusShift).to.be.an('object')
expect(Object.keys(status.phases).length).to.eql(3)
expect(status.phases.preOvulatory).to.eql({
start: { date: '2018-06-01' },
end: { date: '2018-06-05' },
cycleDays: fhm5DaysAfterMucusPeak
.filter(({date}) => date <= '2018-06-05')
})
expect(status.phases.periOvulatory).to.eql({
start: { date: '2018-06-06' },
end: { date: '2018-06-21', time: '18:00' },
cycleDays: fhm5DaysAfterMucusPeak
.filter(({date}) => {
return date > '2018-06-05' && date <= '2018-06-21'
})
})
expect(status.phases.postOvulatory).to.eql({
start: {
date: '2018-06-21',
time: '18:00'
},
cycleDays: fhm5DaysAfterMucusPeak
.filter(({date}) => date >= '2018-06-21')
})
})
})
describe('applying the minus-8 rule', () => {
it('shortens the pre-ovu phase if there is a previous <13 fhm', () => {
const status = getSensiplanStatus({
cycle: longAndComplicatedCycle,
previousCycle: fhmOnDay15,
earlierCycles: [fhmOnDay12, ...Array(10).fill(fhmOnDay15)]
})
expect(status.temperatureShift).to.be.an('object')
expect(status.mucusShift).to.be.an('object')
expect(Object.keys(status.phases).length).to.eql(3)
expect(status.phases.preOvulatory).to.eql({
start: { date: '2018-06-01' },
end: { date: '2018-06-04' },
cycleDays: longAndComplicatedCycle
.filter(({date}) => date <= '2018-06-04')
})
expect(status.phases.periOvulatory).to.eql({
start: { date: '2018-06-05' },
end: { date: '2018-06-21', time: '18:00' },
cycleDays: longAndComplicatedCycle
.filter(({date}) => {
return date > '2018-06-04' && date <= '2018-06-21'
})
})
expect(status.phases.postOvulatory).to.eql({
start: {
date: '2018-06-21',
time: '18:00'
},
cycleDays: longAndComplicatedCycle
.filter(({date}) => date >= '2018-06-21')
})
})
it('shortens pre-ovu phase with prev <13 fhm even with <12 cycles', () => {
const status = getSensiplanStatus({
cycle: longAndComplicatedCycle,
previousCycle: fhmOnDay12,
earlierCycles: Array(10).fill(fhmOnDay12)
})
expect(status.temperatureShift).to.be.an('object')
expect(status.mucusShift).to.be.an('object')
expect(Object.keys(status.phases).length).to.eql(3)
expect(status.phases.preOvulatory).to.eql({
start: { date: '2018-06-01' },
end: { date: '2018-06-04' },
cycleDays: longAndComplicatedCycle
.filter(({date}) => date <= '2018-06-04')
})
expect(status.phases.periOvulatory).to.eql({
start: { date: '2018-06-05' },
end: { date: '2018-06-21', time: '18:00' },
cycleDays: longAndComplicatedCycle
.filter(({date}) => {
return date > '2018-06-04' && date <= '2018-06-21'
})
})
expect(status.phases.postOvulatory).to.eql({
start: {
date: '2018-06-21',
time: '18:00'
},
cycleDays: longAndComplicatedCycle
.filter(({date}) => date >= '2018-06-21')
})
})
it('shortens the pre-ovu phase if mucus occurs', () => {
const status = getSensiplanStatus({
cycle: cycleWithEarlyMucus,
previousCycle: fhmOnDay12,
earlierCycles: Array(10).fill(fhmOnDay12)
})
expect(Object.keys(status.phases).length).to.eql(2)
expect(status.phases.preOvulatory).to.eql({
start: { date: '2018-06-01' },
end: { date: '2018-06-01' },
cycleDays: cycleWithEarlyMucus
.filter(({date}) => date <= '2018-06-01')
})
expect(status.phases.periOvulatory).to.eql({
start: { date: '2018-06-02' },
cycleDays: cycleWithEarlyMucus
.filter(({date}) => {
return date > '2018-06-01'
})
})
})
it('shortens the pre-ovu phase if mucus occurs even on the first day', () => {
const status = getSensiplanStatus({
cycle: cycleWithMucusOnFirstDay,
previousCycle: fhmOnDay12,
earlierCycles: Array(10).fill(fhmOnDay12)
})
expect(Object.keys(status.phases).length).to.eql(1)
expect(status.phases.periOvulatory).to.eql({
start: { date: '2018-06-01' },
cycleDays: cycleWithMucusOnFirstDay
})
})
it('lengthens the pre-ovu phase if >= 12 cycles with fhm > 13', () => {
const status = getSensiplanStatus({
cycle: longAndComplicatedCycle,
previousCycle: fhmOnDay15,
earlierCycles: Array(11).fill(fhmOnDay15)
})
expect(Object.keys(status.phases).length).to.eql(3)
expect(status.phases.preOvulatory).to.eql({
start: { date: '2018-06-01' },
end: { date: '2018-06-07' },
cycleDays: longAndComplicatedCycle
.filter(({date}) => date <= '2018-06-07')
})
expect(status.phases.periOvulatory).to.eql({
start: { date: '2018-06-08' },
end: { date: '2018-06-21', time: '18:00' },
cycleDays: longAndComplicatedCycle
.filter(({date}) => {
return date > '2018-06-07' && date <= '2018-06-21'
})
})
expect(status.phases.postOvulatory).to.eql({
start: {
date: '2018-06-21',
time: '18:00'
},
cycleDays: longAndComplicatedCycle
.filter(({date}) => date >= '2018-06-21')
})
})
it('does not lengthen the pre-ovu phase if < 12 cycles', () => {
const status = getSensiplanStatus({
cycle: longAndComplicatedCycle,
previousCycle: fhmOnDay15,
earlierCycles: Array(10).fill(fhmOnDay15)
})
expect(Object.keys(status.phases).length).to.eql(3)
expect(status.phases.preOvulatory).to.eql({
start: { date: '2018-06-01' },
end: { date: '2018-06-05' },
cycleDays: longAndComplicatedCycle
.filter(({date}) => date <= '2018-06-05')
})
expect(status.phases.periOvulatory).to.eql({
start: { date: '2018-06-06' },
end: { date: '2018-06-21', time: '18:00' },
cycleDays: longAndComplicatedCycle
.filter(({date}) => {
return date > '2018-06-05' && date <= '2018-06-21'
})
})
expect(status.phases.postOvulatory).to.eql({
start: {
date: '2018-06-21',
time: '18:00'
},
cycleDays: longAndComplicatedCycle
.filter(({date}) => date >= '2018-06-21')
})
})
it('does not detect any pre-ovu phase if prev cycle had no fhm', () => {
const status = getSensiplanStatus({
cycle: longAndComplicatedCycle,
previousCycle: cycleWithoutFhm,
earlierCycles: [...Array(12).fill(fhmOnDay15)]
})
expect(Object.keys(status.phases).length).to.eql(2)
expect(status.phases.periOvulatory).to.eql({
start: { date: '2018-06-01' },
end: { date: '2018-06-21', time: '18:00' },
cycleDays: longAndComplicatedCycle
.filter(({date}) => {
return date >= '2018-06-01' && date <= '2018-06-21'
})
})
expect(status.phases.postOvulatory).to.eql({
start: {
date: '2018-06-21',
time: '18:00'
},
cycleDays: longAndComplicatedCycle
.filter(({date}) => date >= '2018-06-21')
})
})
})
describe('when args are wrong', () => {
it('throws when arg object is not in right format', () => {
const wrongObject = { hello: 'world' }
expect(() => getSensiplanStatus(wrongObject)).to.throw(AssertionError)
})
it('throws if cycle array is empty', () => {
expect(() => getSensiplanStatus({cycle: []})).to.throw(AssertionError)
})
it('throws if cycle days are not in right format', () => {
expect(() => getSensiplanStatus({
cycle: [{
hello: 'world',
bleeding: { value: 0 }
}],
earlierCycles: [[{
date: '1992-09-09',
bleeding: { value: 0 }
}]]
})).to.throw(AssertionError)
expect(() => getSensiplanStatus({
cycle: [{
date: '2018-04-13',
temperature: {value: '35'},
bleeding: { value: 0 }
}],
earlierCycles: [[{
date: '1992-09-09',
bleeding: { value: 0 }
}]]
})).to.throw(AssertionError)
expect(() => getSensiplanStatus({
cycle: [{
date: '09-14-2017',
bleeding: { value: 0 }
}],
earlierCycles: [[{
date: '1992-09-09',
bleeding: { value: 0 }
}]]
})).to.throw(AssertionError)
})
it('throws if first cycle day does not have bleeding value', () => {
expect(() => getSensiplanStatus({
cycle: [{
date: '2017-01-01',
bleeding: {
value: 'medium'
}
}],
earlierCycles: [[
{
date: '2017-09-23',
}
]]
})).to.throw(AssertionError)
})
})
})
})